Institute of Science Tokyo · Institute for Advanced Studies

Research keywordssingle-cell transcriptomics・retinal progenitor cells・mitochondrial DNA deletions・tensor decomposition・cell-cell interactions・whole-transcript amplification・developmental epigenetics・gastric progenitor differentiation

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• Genomic characterization of sub-populations in human pluripotent stem cell-derived retinal progenitor cells that drive retinal layer structure 2025.06; ( DOI )2025
• Nakagawa, H; Shima, Y; Sasagawa, Y; Nikaido, I. MitoDelta: identifying mitochondrial DNA deletions at cell-type resolution from single-cell RNA sequencing data BMC GENOMICS. 2025.09; 26 (1): 810. ( PubMed , DOI )2025
• Elucidation of the mechanism of byproduct DNA synthesis in whole-transcript amplification by poly-A tagging and development of its specific suppression 2025.08; ( DOI )2025
• nnTensor: An R package for non-negative matrix/tensor decomposition. 2023.04; ( DOI )2023

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