The University of Tokyo · Graduate School of Frontier Sciences · 准教授

Research keywordsRNA secondary structure・structured RNA alignment・CLIP-seq analysis・RNA-binding proteins・brain tumor segmentation・time-lapse segmentation・population genetics・bioinformatics

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• SCOUP: a probabilistic model based on the Ornstein-Uhlenbeck process to analyze single-cell expression data during differentiation.
• Predictions of RNA secondary structure by combining homologous sequence information.
• reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction.
• Generalized centroid estimators in bioinformatics.

• 拡散ライト・フィッシャーモデルのパラメータ推定による細胞分裂系譜追跡法の開発
• RNA二次構造の大域的性質の集団遺伝解析
• RNA結合タンパク質結合サイト周辺のRNA構造モチーフ発見とデータベース開発
• 先進ゲノム解析研究推進プラットフォーム

• Official profile